The University of Western Australia

UWA Staff Profile

Ipsum Lorem

Assoc/Prof Bruce Gardiner

Associate Professor
Computer Science and Software Engineering, School of

Contact details
Address
School of Computer Science and Software Engineering
The University of Western Australia (M002)
35 Stirling Highway
CRAWLEY WA 6009
Australia
Phone
+61 8 6488 1537
Email
bruce.gardiner@uwa.edu.au
Personal homepage
http://biomed.csse.uwa.edu.au/people_bruce.php
Qualifications
BSc PhD Newcastle(NSW)
Key research
Computational Biology, Systems biology, modelling inter and intra-cellular communication networks, cell-tissue interactions, cartilage, bone, cancer (e.g. colorectal, prostate), glaucoma, kidney oxygenation, developmental biology, tissue mechanics, tissue engineering.
Publications
Book Chapter
1.Zhang, L., B.S. GARDINER, D.W. Smith, P. Pivonka, A.J. Grodzinsky, The Transport of Insulin-like Growth Factor through Cartilage, in Porous Media Applications in Biological Systems and Biotechnology, Editor K. Vafai, To appear.

Journal Articles
2.Zhang, L., B.S. GARDINER, D.W. Smith, P. Pivonka, A.J. Grodzinsky, Integrated model of IGF-I mediated biosynthesis in deformed articular cartilage, Appeared in a topically issue on Micro and Nanomechanics of Biological and Bio-inspired Materials, Journal of Engineering Mechanics 135(5), 439-449, 2009.
3.Pivonka, P., G.A. Narsilio, R.N. Li, D.W. Smith, B. GARDINER, Electrodiffusive Transport in Charged Porous Media: From the Particle-Level Scale to the Macroscopic Scale Using Volume Averaging, Journal of Porous Media 12(2), 101-118, 2009.
4.Evans, R.G., B.S GARDINER, D.W. Smith, P.M. O'Connor, Methods for studying the physiology of kidney oxygenation. Clinical and Experimental Pharmacology and Physiology 35, 1405–1412, 2008.
5.Evans, R.G., B.S GARDINER, D.W. Smith, P.M. O'Connor, Intrarenal oxygenation: unique challenges and the biophysical basis of homeostasis. American Journal of Physiology - Renal Physiology 295, F1259–F1270, 2008.
6.Zhang, L, B.S. GARDINER, D.W. Smith, P. Pivonka, A.J. Grodzinsky, A fully coupled poroelastic reactive-transport model of cartilage. Molecular & Cellular Biomechanics 5(2), 133-153, 2008.
7.Pivonka, P., J. Zimak, D.W. Smith, B. GARDINER, C.B. Dunstan, N.A. Sims, T.J. Martin, G. Mundy. Model Structure and Control of bone remodeling: A Theoretical Study. Bone 43: 249-263, 2008.
8.Zhang, L., B.S. GARDINER, D.W. Smith, P. Pivonka, A.J. Grodzinsky, IGF Uptake with Competitive Binding in Articular Cartilage, Journal of Biological Systems 16(2): 175-195, 2008.
9.Zhang, L., B.S. GARDINER, D.W. Smith, P. Pivonka, A.J. Grodzinsky, The effect of cyclic deformation and solute binding on solute transport in cartilage, Archives of Biochemistry and Biophysics 457 : 47-56, 2007.
10.GARDINER, B.S., D.W. Smith, P. Pivonka, A.J. Grodzinsky, E.H. Frank and L. Zhang, Solute transport in cartilage undergoing cyclic deformation, Computer Methods in Biomechanics and Biomedical Engineering, 10, 265-278, 2007.
11.Pivonka, P., Smith, D.W., B. GARDINER, Investigation of Donnan equilibrium in charged porous materials – a scale transition analysis, Transport in Porous Media 69 (2): 215-237, 2007.
12.GARDINER B.S., A. Tordesillas. Effects of particle size distribution in a three-dimensional micropolar continuum model of granular media. Powder Technology 161: 110-121, 2006.
13.GARDINER, B.S., D.W. Smith, P. Pivonka. A two-dimensional mathematical model for dorsal appendage cell patterning in Drosophila. Developmental Biology 283: 688, 553, 2005
14.Boudreau, B.P., C. Algar, B.D. Johnson, I. Croudace, A. Reed, Y. Furukawa, K.M. Dorgan, P.A. Jumars, A.S. Grader, B.S. GARDINER. Bubble growth and rise in soft sediments, Geology 33(6): 517-520, 2005.
15.GARDINER B.S., A. Tordesillas, The link between discrete and continuous modeling of liquid foam at the level of a single bubble. Journal of Rheology 49(4): 819-838, 2005.
16.GARDINER B.S., A. Tordesillas, Micromechanical constitutive modelling of granular media: evolution and loss of contact in particle clusters, Journal of Engineering Mathematics 52 (1-3): 93-106, 2005.
17.Tordesillas, A., S. D. C. Walsh, B.S. GARDINER, Bridging the length scales: micromechanics of granular media. BIT Numerical Mathematics 44: 539-556, 2004.
18.GARDINER, B.S., A. Tordesillas, Micromechanics of shear bands. International Journal of Solids and Structures 41, pp. 5885-5901, 2004.
19.Tordesillas, A., J.F. Peters, B.S. GARDINER, Shear band evolution and accumulated microstructural development in Cosserat media. International Journal of Numerical and Analytical Methods in Geomechanics. 28: pp. 981-1010, 2004.
20.Tordesillas, A., J. F. Peters, B.S. GARDINER, Insights into 1D localisation theory and micromechanical constitutive laws. Geotechnique. 54: 327-330, 2004.
21.GARDINER, B.S., B. P. Boudreau, B. D. Johnson, Slow growth of an isolated disk-shaped bubble of constant eccentricity in the presence of a distributed gas source. Applied Mathematical Modelling 27: 817-829, 2003.
22.GARDINER, B.S., B. P. Boudreau B. D. Johnson, Growth of disk-shaped bubbles in sediments. Geochimica et Cosmochimica Acta 67: 1485-1494, 2003.
23.Johnson, B.D., B. P. Boudreau, B.S. GARDINER, R. Maas, Mechanical response of sediments to bubble growth. Marine Geology 187: 347-363, 2002.
24.Boudreau, B.P., B.S. GARDINER, B. D. Johnson, Rate of growth of isolated bubbles in sediments with a diagenetic source of methane (vol 46, pg 616, 2001). Limnology and Oceanography. 46: 1578-1578, 2001.
25.Boudreau, B.P., B.S. GARDINER, B. D. Johnson, Rate of growth of isolated bubbles in sediments with a diagenetic source of methane Limnology and Oceanography 46: 616-622, 2001.
26.GARDINER, B.S., A. Tordesillas, Incorporating combined micro-slip and gross-slip at inter-particle contacts in the development of constitutive laws for granular media, US ARO Technical Report Grant No DAAD19-02-1-0216, Dec 2001.
27.GARDINER, B.S., B.Z. Dlugogorski, G.J. Jameson, The steady shear of three-dimensional wet polydisperse foams. Journal of Non-Newtonian Fluid Mechanics 92: 151-166, 2000.
28.GARDINER, B.S., B.Z. Dlugogorski, G.J. Jameson. Coarsening of two- and three-dimensional wet polydisperse foams. Philosophical Magazine A-Physics of Condensed Matter Struct. Defects Mech. Prop. 80: 981-1000, 2000.
29.GARDINER, B.S., B.Z. Dlugogorski, G.J. Jameson, Prediction of pressure losses in pipe flow of aqueous foam. Industrial and Engineering Chemistry Research 38: 1099-1106, 1999.
30.GARDINER, B.S., B.Z. Dlugogorski, G.J. Jameson, The evolution of defects in a two-dimensional wet foam. Journal of Physics-Condensed Matter 11: 5437-5453, 1999.
31.GARDINER, B.S., B.Z. Dlugogorski, G.J. Jameson, R. P. Chhabra. Yield stress measurements of aqueous foams in the dry limit. Journal of Rheology 42: 1437-1450, 1998.
32.GARDINER, B.S., B.Z. Dlugogorski, G.J. Jameson, Rheology of fire-fighting foams. Fire Safety Journal 31: 61-75, 1998.


PEER REVIEWED CONFERENCE PUBLICATIONS:

33.Smith, D.W., L. Zhang, B.S. GARDINER, P. Pivonka, A.J. Grodzinsky, Theoretical investigation of the functional role of free IGFBP3 in modulating the uptake of IGF-I by articular cartilage, To appear The 54th Annual Meeting of the Orthopaedic Research Society, San Francisco USA, 2-5 March, 2008.
34.D.W. Smith, L. Zhang, B.S. GARDINER, P. Pivonka, A.J. Grodzinsky, Effects of ECM binding on solute transport in cyclically deformed cartilage, The 53rd Annual Meeting of the Orthopaedic Research Society, San Diego USA, 11-14th February, 2007.
35.L. Zhang, B.S. GARDINER, D.W. Smith, P. Pivonka, Solute Transport in Cartilage: Effects of Cyclic Deformation and ECM Binding, 15th International Conference on Mechanics in Medicine and Biology (ICMMB-15), Singapore, 6-8th December, pp 171-172, 2006.
36.Pivonka, P., D. Smith, B. GARDINER and C. Dunstan. Hierarchical model describing bone cell dynamics: application to bone remodeling. 15th International Conference on Mechanics in Medicine and Biology (ICMMB-15), Singapore, 6-8 December, pp 225-226, 2006.
37.Pivonka, P., Smith, D.W., B. GARDINER, Fundamental theoretical study of nanoscale ion transport through charged porous materials: Part I – diffusion. In Y. Abousleiman, A. Cheng, F.-J. Ulm, editors, Proceedings of the 3rd Biot Conference on Poromechanics (Oklahoma City, USA, May 24-27, 2005), A.A. Balkema Publishers, London, UK, pp 417-422, 2005.
38.Pivonka, P., Smith, D.W., B. GARDINER, Fundamental theoretical study of nanoscale ion transport through charged porous materials: Part II ¬ diffusion-advection. In Y. Abousleiman, A. Cheng, F.-J. Ulm, editors, Proceedings of the 3rd Biot Conference on Poromechanis (Oklahoma City, USA, May 24-27, 2005), A.A. Balkema Publishers, London, UK, pp 449-453, 2005.
39.Pivonka, P., D. Smith, B. GARDINER, Modeling of Donnan Equilibrium in charged porous materials – a scale transition analysis, In D.R.J. Owen and E. Oñate and B. Suárez, editors, Proceedings of the 8th International Conference on Computational Plasticity (COMPLAS VIII, Barcelona, Spain, 5-8 September, 2005), pp 147-151, 2005.
40.Pivonka, P., D. Smith, B. GARDINER, Upscaling of the Poisson-Nernst-Planck Equations using the Volume Averaging Method, In T.E. Simos, and G. Psihoyios, and Ch. Tsitouras, editors, Proceedings of International Conference on Numerical Analysis and Applied Mathematics 2005 (ICNAAM, Rhodes, Greece, 16-20 September, 2005), pp 443-446, 2005, Wiley-VCH.
41.GARDINER, B.S., Smith, D.W., Pivonka, P., Grodzinsky, A.J. Transport of large molecules through articular cartilage subject to dynamic loading' 10th Annual Scientific Meeting of the Australian and New Zealand Orthopaedic Research Society, Sydney, Australia, 22-24 October, 2004.
42.GARDINER, B.S., A. Tordesillas, Evolution of anisotropies in shear bands. Proceedings of the Workshop Quasi-Static Deformations of Particulate Materials (QuaDPM'03), Budapest, Hungary, pp 107-118, 2003.
43.GARDINER, B.S., B.Z. Dlugogorski, G.J. Jameson. Yield-stress measurements of fire-fighting foams. Halon Technical Working Conference, Albuquerque, USA, 1998
44.GARDINER, B.S., B.Z. Dlugogorski, G.J. Jameson, Prediction of pressure losses in pumping of compressed-air fire-fighting foams. 5th International Symposium on Fire Safety Science, Melbourne, Australia, 1997.
45.GARDINER, B.S., B. Z. Dlugogorski, G. J. Jameson, Behaviour of foams in tubular flow. Proceedings of 2nd Pacific Rim Conference on Rheology, Melbourne, Australia, 1997.
46.GARDINER, B.S., B. Z. Dlugogorski, G. J. Jameson, Molecular dynamic simulation of static and shear flow behaviour of wet foams. CHEMECA ’97, Rotorua, New Zealand, 1997.
47.GARDINER, B.S., B. Z. Dlugogorski, G. J. Jameson, Flow and rheology of high-expansion foams in pipes. Proceedings of the XIIth International Congress of Rheology, Quebec, Canada, 1996
48.GARDINER, B.S., Hu, Y.D., B.J. Fraser, Kelvin-Helmholtz instability within magnetotail boundary layers, paper GAB41I-4, XXI General Assembly of the International Union of Geodesy and Geophysics, Boulder USA, July 1995.
Funding received
2011-2014 ARC LP110100581 Bioengineered bioscaffolds for Achilles tendinopathy treatment, DG Lloyd, DW Smith, J Xu, BS Gardiner, TB Kirk, J Rubenson, M Zheng, $840,000.
2009-2011 ARC DP0988001 Engineering cartilage homeostasis in health and disease, DW Smith, BS Gardiner, AJ Grodzinsky $230,000.
2009-2011 NH&MRC 542531 Stimulations of colon cancer, AW Burgess, DW Smith, BS Gardiner $528,750.
2009-2011 NH&MRC 529918 Regulating fluid mechanics to improve the outcome of glaucoma surgery, JG Crowston, DW Smith, BS Gardiner, MA Coote $269,250.
2009-2010 Prostate Cancer Foundation of Australia Concept grant CG10 Integrative systems modelling of prostate cancer bone metastases, DW Smith, BS Gardiner, P Pivonka, GR Mundy, NA Bhowmick. $280,000
2005Australian Academy of Science Scientific visits to the United States, Canada and Mexico. 30 day visit to Professor Alan Grodzinsky, at the Center for Biomedical Engineering at the Massachusetts Institute of Technology, Boston USA.$8500
2003Melbourne Research Grant Scheme$25,200
2002Australian Postdoctoral Fellowship (APD) -
1995University of Newcastle Postgraduate Research Scholarship$80,000
Honours and awards
2009-Honorary Senior Fellow, Department of Electrical and Electronic Engineering, The University of Melbourne, Australia.
2009-Oz reader ARC
Previous positions
2009-Research Associate Professor. School of Computer Science and Software Engineering, The University of Western Australia.
2007 –2009 Senior Lecturer, Biomedical Engineering, Department of Civil and Environmental Engineering, The University of Melbourne, Australia.
2004 - 2007 Senior Research Fellow, Department of Civil and Environmental Engineering, The University of Melbourne, Australia.
2001 - 2004 Research Fellow, Department of Mathematics and Statistics, The University of Melbourne, Australia.
1999 - 2001 Postdoctoral Fellow, Department of Oceanography, Dalhousie University, Canada.
Useful links
Engineering Computational Biology at UWA
http://biomed.csse.uwa.edu.au/
Research profile
Research profile and publications
 

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Tuesday, 3 November, 2015 2:39 PM